STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72587.1PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC transporter, permease/ATP-binding protein. (606 aa)    
Predicted Functional Partners:
AFL72586.1
PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.787
AFL74405.1
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly; PFAM: ABC transporter; ABC transporter transmembrane region.
  
 
0.773
AFL73771.1
PFAM: Phosphopantetheine attachment site; Acyltransferase; AMP-binding enzyme; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 0.764
AFL72643.1
PFAM: ATPase family associated with various cellular activities (AAA).
   
 0.617
AFL74971.1
PFAM: ATPase family associated with various cellular activities (AAA).
   
 0.617
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
 
 0.558
AFL73369.1
PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
    
 
 0.544
AFL73837.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.519
AFL75110.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
  
 
 0.507
AFL76092.1
PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
     
 0.506
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.