STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72614.1PFAM: Polysulphide reductase, NrfD. (416 aa)    
Predicted Functional Partners:
AFL72613.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
 
 0.990
AFL72612.1
Hypothetical protein.
 
  
 0.975
AFL72611.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.930
AFL72671.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.904
AFL76326.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.904
cbiA
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing), cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.903
AFL76327.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
 
 0.894
AFL72609.1
PFAM: Nitrate reductase gamma subunit.
 
  
 0.893
AFL72610.1
Fe-S oxidoreductase.
 
  
 0.887
AFL75773.1
Fe-S-cluster-containing hydrogenase subunit.
 
 
 0.883
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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