STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72807.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (561 aa)    
Predicted Functional Partners:
AFL72808.1
PFAM: Glycosyl transferase family 2.
  
 0.982
AFL76378.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104).
 
  
 0.812
AFL75788.1
PFAM: GtrA-like protein; Glycosyl transferase family 2.
 
  
 0.792
AFL72809.1
PFAM: Protein of unknown function (DUF615); Belongs to the UPF0307 family.
       0.773
AFL72930.1
PFAM: PAP2 superfamily.
 
  
 0.770
AFL72810.1
PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.
       0.678
AFL74206.1
PFAM: Glycosyl transferase family 2.
  
  
 0.647
AFL75017.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
 
   
 0.581
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.559
AFL74598.1
Putative glycosyltransferase; PFAM: Methyltransferase domain; Glycosyl transferase family 2.
     
 0.524
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.