STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72904.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
AFL72101.1
Putative double-glycine peptidase; PFAM: Peptidase C39 family.
 
     0.803
AFL72906.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
 
     0.802
AFL72905.1
Hypothetical protein.
       0.773
AFL76116.1
PFAM: Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
  
     0.712
AFL75717.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
     0.659
AFL76046.1
Diguanylate cyclase (GGDEF) domain-containing protein; PFAM: EAL domain; GGDEF domain; GAF domain; Phytochrome region; PAS fold; TIGRFAM: photoactive yellow protein; diguanylate cyclase (GGDEF) domain.
  
    0.595
AFL72129.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; NMT1/THI5 like.
  
     0.548
AFL73327.1
PAS domain S-box; PFAM: EAL domain; GAF domain; Response regulator receiver domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
  
     0.538
AFL75055.1
Hypothetical protein.
  
     0.523
AFL74489.1
PFAM: Protein of unknown function (DUF2892).
  
     0.507
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.