STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72917.1Putative O-linked N-acetylglucosamine transferase, SPINDLY family; PFAM: Tetratricopeptide repeat. (972 aa)    
Predicted Functional Partners:
AFL72927.1
TIGRFAM: methyltransferase, FkbM family.
    
0.665
AFL72918.1
Putative O-linked N-acetylglucosamine transferase, SPINDLY family; PFAM: Tetratricopeptide repeat.
 
    
0.629
AFL75559.1
PFAM: Papain family cysteine protease.
  
     0.597
AFL72916.1
Putative O-linked N-acetylglucosamine transferase, SPINDLY family; PFAM: Tetratricopeptide repeat.
 
    
0.591
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.576
AFL72915.1
Tetratricopeptide repeat protein,methyltransferase family protein; PFAM: Methyltransferase domain; Tetratricopeptide repeat.
 
 
0.562
AFL74434.1
Putative methyltransferase (contains TPR repeat); PFAM: Methyltransferase domain; Tetratricopeptide repeat.
 
 
0.523
AFL74598.1
Putative glycosyltransferase; PFAM: Methyltransferase domain; Glycosyl transferase family 2.
 
   
 0.492
AFL72919.1
PFAM: Cephalosporin hydroxylase.
 
     0.488
AFL76092.1
PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.430
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.