STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73091.1PFAM: YcfA-like protein; manually curated. (58 aa)    
Predicted Functional Partners:
AFL73090.1
PFAM: Uncharacterised protein family (UPF0150).
   
 
 0.895
AFL73087.1
PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; Belongs to the complex I 20 kDa subunit family.
       0.727
AFL73088.1
NADH:ubiquinone oxidoreductase 27 kD subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit.
       0.727
AFL73089.1
PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Belongs to the complex I 49 kDa subunit family.
       0.727
AFL73092.1
Hypothetical protein.
       0.709
AFL73093.1
Multisubunit Na+/H+ antiporter, MnhE subunit; PFAM: Na+/H+ ion antiporter subunit.
       0.709
AFL75446.1
PFAM: Uncharacterised protein family (UPF0150).
 
 
 
 0.685
AFL75582.1
Hypothetical protein; Manually curated.
  
     0.654
AFL73909.1
PFAM: Protein of unknown function (DUF3532).
 
 
 
 0.575
AFL73841.1
Uncharacterized small protein; PFAM: Uncharacterised protein family (UPF0175).
  
     0.565
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.