STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73355.1Type II secretory pathway, component ExeA (predicted ATPase); PFAM: ATPase family associated with various cellular activities (AAA). (321 aa)    
Predicted Functional Partners:
AFL73354.1
Integrase family protein; PFAM: Integrase core domain.
 
     0.949
AFL72266.1
Integrase family protein; PFAM: Integrase core domain.
 
     0.785
AFL76180.1
Integrase family protein; PFAM: Integrase core domain.
 
     0.785
AFL73353.1
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
 
     0.753
AFL72465.1
Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.549
AFL73356.1
PFAM: Cysteine-rich secretory protein family.
       0.479
AFL73357.1
Hypothetical protein.
       0.479
AFL73358.1
Hypothetical protein.
       0.462
AFL73359.1
Hypothetical protein.
       0.462
AFL73360.1
Hypothetical protein.
       0.448
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.