STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73399.1Arginine:ornithine antiporter, APA family; PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family; TC 2.A.3.2.3. (474 aa)    
Predicted Functional Partners:
arcA
Arginine deiminase; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase.
 
  
 0.946
AFL73185.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
    
 0.943
AFL73338.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
    
 0.943
AFL75149.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
    
 0.943
AFL75952.1
PFAM: Acetyltransferase (GNAT) family.
    
 0.943
AFL74771.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
  
 0.797
AFL73402.1
Putative membrane protein; PFAM: C4-dicarboxylate anaerobic carrier.
 
    0.771
AFL74074.1
Chorismate mutase, clade 2; PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2.
   
 
 0.591
AFL73398.1
Hypothetical protein.
       0.563
AFL73839.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.554
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.