STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73497.1Beta-lactamase class D; PFAM: Penicillin binding protein transpeptidase domain. (258 aa)    
Predicted Functional Partners:
AFL74908.1
Beta-lactamase class D; PFAM: Penicillin binding protein transpeptidase domain.
  
  
 
0.900
AFL73496.1
Hypothetical protein.
       0.502
AFL73498.1
PFAM: Mating pair stabilisation protein TraN.
       0.480
AFL73499.1
PFAM: TraU protein.
       0.480
AFL73500.1
PFAM: Type-F conjugative transfer system pilin assembly protein.
       0.480
AFL73501.1
PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
       0.480
AFL73502.1
Hypothetical protein.
       0.480
AFL73503.1
Hypothetical protein; TIGRFAM: type-IV secretion system protein TraC.
       0.480
AFL75934.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.451
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.