STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73533.1Putative metal-dependent hydrolase; PFAM: Protein of unknown function DUF45. (236 aa)    
Predicted Functional Partners:
AFL73534.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family.
 
   
 0.944
AFL74789.1
PFAM: Type I restriction modification DNA specificity domain; manually curated.
 
     0.746
AFL73538.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
 
     0.742
AFL74785.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
 
     0.731
AFL73537.1
PFAM: Type I restriction modification DNA specificity domain.
 
     0.714
AFL73536.1
Hypothetical protein.
  
    0.502
AFL73535.1
Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein; manually curated.
       0.480
AFL72948.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase.
 
     0.441
AFL73531.1
Putative transcriptional regulator with C-terminal CBS domains; PFAM: Helix-turn-helix.
       0.441
AFL73530.1
Hypothetical protein.
       0.434
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.