STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73733.1Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region. (300 aa)    
Predicted Functional Partners:
AFL73206.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403).
  
 0.982
AFL73732.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF404); Domain of unknown function (DUF407).
 
  
 0.977
AFL73289.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403).
  
 0.949
AFL73207.1
Hypothetical protein; PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407).
 
  
 0.844
AFL73290.1
Hypothetical protein; PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407).
 
  
 0.844
AFL73734.1
PFAM: Predicted periplasmic lipoprotein (DUF2279).
       0.773
AFL73731.1
PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
     
 0.576
AFL75736.1
Hypothetical protein; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; Putative amidoligase enzyme (DUF2126).
 
    
0.407
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.