Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFL73952.1 | AFL73957.1 | Thivi_1994 | Thivi_1999 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.990 |
| AFL73952.1 | AFL73958.1 | Thivi_1994 | Thivi_2000 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | Photosynthetic reaction center L subunit; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosynthetic reaction center L subunit. | 0.990 |
| AFL73952.1 | AFL73961.1 | Thivi_1994 | Thivi_2003 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | PFAM: Proto-chlorophyllide reductase 57 kD subunit; Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Z. | 0.799 |
| AFL73952.1 | AFL73967.1 | Thivi_1994 | Thivi_2010 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Y. | 0.818 |
| AFL73952.1 | AFL73969.1 | Thivi_1994 | Thivi_2012 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.797 |
| AFL73952.1 | AFL73970.1 | Thivi_1994 | Thivi_2013 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: O-methyltransferase. | 0.772 |
| AFL73952.1 | AFL73971.1 | Thivi_1994 | Thivi_2014 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.745 |
| AFL73952.1 | AFL73972.1 | Thivi_1994 | Thivi_2015 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase. | 0.700 |
| AFL73952.1 | AFL73973.1 | Thivi_1994 | Thivi_2016 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | PFAM: Hydroxyneurosporene synthase (CrtC). | 0.789 |
| AFL73952.1 | AFL74350.1 | Thivi_1994 | Thivi_2405 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | Photosynthetic reaction center, subunit H, bacterial; PFAM: Photosynthetic reaction centre, H-chain N-terminal region; PRC-barrel domain; TIGRFAM: photosynthetic reaction center, subunit H, bacterial. | 0.987 |
| AFL73957.1 | AFL73952.1 | Thivi_1999 | Thivi_1994 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.990 |
| AFL73957.1 | AFL73958.1 | Thivi_1999 | Thivi_2000 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center L subunit; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosynthetic reaction center L subunit. | 0.992 |
| AFL73957.1 | AFL73961.1 | Thivi_1999 | Thivi_2003 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | PFAM: Proto-chlorophyllide reductase 57 kD subunit; Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Z. | 0.932 |
| AFL73957.1 | AFL73967.1 | Thivi_1999 | Thivi_2010 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Y. | 0.829 |
| AFL73957.1 | AFL73969.1 | Thivi_1999 | Thivi_2012 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.819 |
| AFL73957.1 | AFL73970.1 | Thivi_1999 | Thivi_2013 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: O-methyltransferase. | 0.794 |
| AFL73957.1 | AFL73971.1 | Thivi_1999 | Thivi_2014 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.753 |
| AFL73957.1 | AFL73972.1 | Thivi_1999 | Thivi_2015 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase. | 0.710 |
| AFL73957.1 | AFL73973.1 | Thivi_1999 | Thivi_2016 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | PFAM: Hydroxyneurosporene synthase (CrtC). | 0.803 |
| AFL73957.1 | AFL74350.1 | Thivi_1999 | Thivi_2405 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center, subunit H, bacterial; PFAM: Photosynthetic reaction centre, H-chain N-terminal region; PRC-barrel domain; TIGRFAM: photosynthetic reaction center, subunit H, bacterial. | 0.997 |
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