STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL74063.1Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (504 aa)    
Predicted Functional Partners:
AFL74305.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: GAF domain; Phytochrome region; PAS fold.
 
     0.923
AFL74325.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: GAF domain; Phytochrome region; PAS fold.
 
     0.922
AFL75126.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: GAF domain; Phytochrome region; PAS fold.
 
     0.920
AFL74510.1
Methylase of chemotaxis methyl-accepting protein; PFAM: CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold.
   
 0.899
AFL75539.1
PAS domain S-box; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
     0.890
AFL72727.1
PAS domain S-box; PFAM: Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 
0.861
AFL74060.1
PFAM: Response regulator receiver domain.
     0.858
AFL72621.1
PAS domain S-box; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.853
AFL73040.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box.
 
 
 
0.846
AFL74877.1
Methylase of chemotaxis methyl-accepting protein; PFAM: CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold.
   
 0.844
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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