STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL74402.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
AFL74403.1
SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Peptidase S24-like; Belongs to the peptidase S24 family.
       0.773
AFL74404.1
Putative signal transduction protein; PFAM: HDOD domain.
       0.618
AFL74401.1
PFAM: Metallo-beta-lactamase superfamily; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.483
AFL74405.1
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly; PFAM: ABC transporter; ABC transporter transmembrane region.
       0.431
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.