STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL74595.1SapC; PFAM: SapC. (322 aa)    
Predicted Functional Partners:
AFL72277.1
Hypothetical protein.
 
     0.590
AFL74597.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
     0.572
AFL74596.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
     0.560
AFL74598.1
Putative glycosyltransferase; PFAM: Methyltransferase domain; Glycosyl transferase family 2.
 
     0.548
AFL73232.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.536
AFL72945.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.531
AFL73900.1
PFAM: ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family.
 
     0.531
AFL74218.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.511
AFL72411.1
PFAM: SprA-related family.
  
     0.483
ureC
PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit.
    
   0.454
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.