STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL74896.1Putative transcriptional regulator; PFAM: Helix-turn-helix. (92 aa)    
Predicted Functional Partners:
AFL73535.1
Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein; manually curated.
   
 
 0.689
AFL76410.1
Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family.
   
 
 0.689
AFL72616.1
LysM domain-containing protein; PFAM: LysM domain.
   
    0.463
AFL74129.1
Putative phospholipid-binding protein,LysM domain-containing protein; PFAM: Putative phospholipid-binding domain; LysM domain.
   
    0.463
AFL72300.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
    0.431
AFL74492.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
   
    0.412
AFL72302.1
PFAM: SpoVR like protein.
   
    0.410
AFL73841.1
Uncharacterized small protein; PFAM: Uncharacterised protein family (UPF0175).
  
     0.409
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.