STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL74981.1Putative ATPase. (504 aa)    
Predicted Functional Partners:
AFL74982.1
Hypothetical protein.
       0.791
AFL76241.1
TIGRFAM: tape measure domain.
  
     0.580
AFL75031.1
Type I restriction-modification system methyltransferase subunit; PFAM: Eco57I restriction endonuclease.
 
     0.567
AFL76148.1
Putative ATPase.
  
     0.567
AFL72495.1
Hypothetical protein; Manually curated.
   
    0.552
AFL75191.1
PFAM: Protein of unknown function (DUF820).
  
     0.500
AFL76149.1
Hypothetical protein.
 
     0.485
AFL73601.1
PFAM: Protein of unknown function (DUF3604).
  
     0.471
AFL72360.1
PFAM: Protein of unknown function (DUF820).
  
     0.466
AFL76260.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.460
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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