Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFL72360.1 | AFL74981.1 | Thivi_0291 | Thivi_3104 | PFAM: Protein of unknown function (DUF820). | Putative ATPase. | 0.466 |
AFL72495.1 | AFL74981.1 | Thivi_0426 | Thivi_3104 | Hypothetical protein; Manually curated. | Putative ATPase. | 0.552 |
AFL72495.1 | AFL76148.1 | Thivi_0426 | Thivi_4338 | Hypothetical protein; Manually curated. | Putative ATPase. | 0.552 |
AFL73601.1 | AFL74981.1 | Thivi_1617 | Thivi_3104 | PFAM: Protein of unknown function (DUF3604). | Putative ATPase. | 0.471 |
AFL73601.1 | AFL76241.1 | Thivi_1617 | Thivi_4439 | PFAM: Protein of unknown function (DUF3604). | TIGRFAM: tape measure domain. | 0.560 |
AFL74981.1 | AFL72360.1 | Thivi_3104 | Thivi_0291 | Putative ATPase. | PFAM: Protein of unknown function (DUF820). | 0.466 |
AFL74981.1 | AFL72495.1 | Thivi_3104 | Thivi_0426 | Putative ATPase. | Hypothetical protein; Manually curated. | 0.552 |
AFL74981.1 | AFL73601.1 | Thivi_3104 | Thivi_1617 | Putative ATPase. | PFAM: Protein of unknown function (DUF3604). | 0.471 |
AFL74981.1 | AFL74982.1 | Thivi_3104 | Thivi_3105 | Putative ATPase. | Hypothetical protein. | 0.791 |
AFL74981.1 | AFL75031.1 | Thivi_3104 | Thivi_3154 | Putative ATPase. | Type I restriction-modification system methyltransferase subunit; PFAM: Eco57I restriction endonuclease. | 0.567 |
AFL74981.1 | AFL75191.1 | Thivi_3104 | Thivi_3318 | Putative ATPase. | PFAM: Protein of unknown function (DUF820). | 0.500 |
AFL74981.1 | AFL76148.1 | Thivi_3104 | Thivi_4338 | Putative ATPase. | Putative ATPase. | 0.567 |
AFL74981.1 | AFL76149.1 | Thivi_3104 | Thivi_4339 | Putative ATPase. | Hypothetical protein. | 0.485 |
AFL74981.1 | AFL76241.1 | Thivi_3104 | Thivi_4439 | Putative ATPase. | TIGRFAM: tape measure domain. | 0.580 |
AFL74981.1 | AFL76260.1 | Thivi_3104 | Thivi_4463 | Putative ATPase. | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. | 0.460 |
AFL74982.1 | AFL74981.1 | Thivi_3105 | Thivi_3104 | Hypothetical protein. | Putative ATPase. | 0.791 |
AFL75031.1 | AFL74981.1 | Thivi_3154 | Thivi_3104 | Type I restriction-modification system methyltransferase subunit; PFAM: Eco57I restriction endonuclease. | Putative ATPase. | 0.567 |
AFL75031.1 | AFL75191.1 | Thivi_3154 | Thivi_3318 | Type I restriction-modification system methyltransferase subunit; PFAM: Eco57I restriction endonuclease. | PFAM: Protein of unknown function (DUF820). | 0.403 |
AFL75191.1 | AFL74981.1 | Thivi_3318 | Thivi_3104 | PFAM: Protein of unknown function (DUF820). | Putative ATPase. | 0.500 |
AFL75191.1 | AFL75031.1 | Thivi_3318 | Thivi_3154 | PFAM: Protein of unknown function (DUF820). | Type I restriction-modification system methyltransferase subunit; PFAM: Eco57I restriction endonuclease. | 0.403 |
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