STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL75155.1Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. (346 aa)    
Predicted Functional Partners:
AFL75156.1
TIGR03440 family protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein.
  
 0.997
AFL75154.1
Hypothetical protein.
       0.664
AFL74390.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
  
 0.593
AFL75612.1
Hypothetical protein; PFAM: Domain of unknown function (DUF427).
 
     0.579
AFL73421.1
Cysteine desulfurase-like protein, SufS subfamily; PFAM: Fe-S metabolism associated domain; Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.546
AFL72538.1
PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system.
 
     0.545
AFL76419.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
  
 0.531
AFL76337.1
PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme.
  
  
 0.480
AFL72891.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
  
  
 0.447
AFL75296.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
  
  
 0.447
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.