STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL75239.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
AFL75740.1
Putative Rossmann fold nucleotide-binding protein; PFAM: Possible lysine decarboxylase.
  
     0.735
AFL75055.1
Hypothetical protein.
  
     0.718
AFL73924.1
Hypothetical protein.
  
     0.702
AFL74281.1
Hypothetical protein.
  
     0.681
AFL75124.1
PFAM: RyR domain.
  
     0.665
AFL74778.1
PFAM: General secretion pathway protein M.
  
     0.656
AFL73870.1
Hypothetical protein.
  
     0.616
AFL73650.1
Hypothetical protein; PFAM: Adenosylcobinamide amidohydrolase.
  
     0.614
AFL75722.1
Hypothetical protein.
  
     0.607
AFL74781.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.593
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.