STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL76051.1Ribulose 1,5-bisphosphate carboxylase, large subunit; PFAM: Ribulose bisphosphate carboxylase large chain, N-terminal domain; Ribulose bisphosphate carboxylase large chain, catalytic domain; Belongs to the RuBisCO large chain family. (464 aa)    
Predicted Functional Partners:
AFL73560.1
PFAM: Ribulose bisphosphate carboxylase, small chain.
 
 0.983
AFL73885.1
PFAM: Phosphoribulokinase / Uridine kinase family.
 
 
 0.969
pgk
PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
  
 0.919
AFL76048.1
Nitric oxide reductase activation protein; PFAM: von Willebrand factor type A domain.
 
   
 0.824
AFL73950.1
Ribulose 1,5-bisphosphate carboxylase, large subunit; PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain.
  
  
 
0.704
AFL72591.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
  
  
 0.702
AFL75002.1
Ribulose 1,5-bisphosphate carboxylase, large subunit; PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain.
  
  
 
0.701
cbbL
Ribulose 1,5-bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
  
 
0.694
AFL72279.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
    
 0.671
cbbZ
2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.671
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.