STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL76082.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
AFL76080.1
Putative RND superfamily exporter; PFAM: MMPL family.
   
 0.971
AFL76081.1
Hypothetical protein.
 
     0.951
AFL75835.1
PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain.
    
   0.720
AFL72778.1
PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family.
   
 
 0.635
AFL73687.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
   
 
 0.635
AFL76087.1
PFAM: Autoinducer synthetase; TIGRFAM: putative PEP-CTERM/exosortase system-associated acyltransferase.
 
     0.621
AFL75295.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
   
 
 0.616
AFL72811.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
 
 0.596
AFL72965.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
 
 0.596
AFL75294.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
 
 0.593
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.