STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA89031.1Hypothetical protein; PFAM: Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family. (107 aa)    
Predicted Functional Partners:
AGA91931.1
NifQ; PFAM: NifQ.
  
  
 0.665
AGA90918.1
Cysteine desulfurase family protein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.544
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.524
AGA89032.1
PFAM: FAD dependent oxidoreductase; TIGRFAM: phytoene desaturase; carotene isomerase.
       0.497
AGA92005.1
PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 0.469
AGA91421.1
Cysteine desulfurase DndA; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase DndA.
  
  
 0.465
AGA89027.1
Hypothetical protein.
     
 0.447
AGA89029.1
PFAM: Polysulphide reductase, NrfD.
     
 0.443
AGA90961.1
FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
  
 
 0.439
AGA90963.1
FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
  
 
 0.439
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.