STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA89094.1Ankyrin repeat-containing protein; PFAM: Ankyrin repeat. (254 aa)    
Predicted Functional Partners:
AGA90226.1
Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; 2-nitropropane dioxygenase; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
   
 0.935
AGA89923.1
TIR domain-containing protein; PFAM: TIR domain; Ras family.
 
 0.928
AGA89447.1
PFAM: Domain of unknown function DUF29.
    
 0.924
AGA89452.1
PFAM: Protein of unknown function (DUF1566).
    
 0.864
AGA91090.1
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.
   
 
 0.846
AGA90262.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
  
     0.774
AGA90877.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
  
     0.774
AGA90909.1
PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1.
    
 
 0.761
AGA91153.1
DNA repair exonuclease; PFAM: Calcineurin-like phosphoesterase.
    
  0.760
AGA92088.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
    
 0.754
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.