STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA89400.1Putative nucleic-acid-binding protein, contains PIN domain. (146 aa)    
Predicted Functional Partners:
AGA89399.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.774
vapC
Putative nucleic-acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.526
AGA90081.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.518
AGA89726.1
Muramidase (phage lambda lysozyme); PFAM: TraG-like protein, N-terminal region.
  
     0.509
AGA91766.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein.
  
     0.502
AGA91856.1
Hypothetical protein.
  
     0.466
AGA91764.1
PFAM: Protein of unknown function (DUF3485); Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: EpsI family protein; eight transmembrane protein EpsH (proposed exosortase).
  
     0.450
AGA89706.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.435
AGA90080.1
Hypothetical protein; PFAM: PIN domain.
  
     0.425
AGA89725.1
PFAM: Conjugative relaxosome accessory transposon protein.
  
     0.407
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.