STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA89483.1PFAM: Bacterial type II secretion system protein G; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (285 aa)    
Predicted Functional Partners:
AGA89492.1
Type II secretory pathway, component PulD; PFAM: Protein of unknown function (DUF3438); Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.827
AGA89485.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
     
 0.785
AGA89484.1
Hypothetical protein.
       0.783
AGA89502.1
PFAM: Imelysin.
  
     0.764
AGA89504.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
     0.723
AGA89496.1
Putative periplasmic lipoprotein; PFAM: Imelysin.
  
     0.688
AGA89498.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488).
  
     0.686
AGA91848.1
TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.632
AGA89499.1
PFAM: Protein of unknown function DUF58.
  
     0.630
AGA89501.1
Putative thiol oxidoreductase; PFAM: Protein of unknown function (DUF1111).
  
     0.630
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.