Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
AGA89536.1Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403). (314 aa)    
Predicted Functional Partners:
AGA89537.1
Hypothetical protein; PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404).
    0.976
AGA91080.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily.
  
 0.938
AGA89394.1
Hypothetical protein; PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407).
    0.911
AGA89538.1
Putative proteasome-type protease.
 
    0.862
AGA90311.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region.
 
  
 0.802
AGA91079.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF404); Domain of unknown function (DUF407).
 
   
0.668
AGA89395.1
Hypothetical protein; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; Putative amidoligase enzyme (DUF2126).
 
    0.517
AGA89535.1
Plasma-membrane calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
       0.446
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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