Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA89646.1PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (134 aa)    
Predicted Functional Partners:
AGA89649.1
Hypothetical protein.
  
  
 0.891
AGA91847.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.834
AGA91848.1
TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.820
AGA89647.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.819
AGA89648.1
Hypothetical protein.
       0.818
AGA88959.1
PFAM: Fimbrial assembly protein (PilN).
 
  
 0.802
AGA88960.1
PFAM: Pilus assembly protein, PilO.
 
  
 0.785
AGA88961.1
PFAM: Pilus assembly protein, PilP.
  
  
 0.785
AGA91846.1
Tfp pilus assembly protein PilX.
 
  
 0.785
AGA88958.1
PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM.
 
   
 0.784
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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