Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA89682.1PFAM: Protein of unknown function (DUF1249). (174 aa)    
Predicted Functional Partners:
smg
PFAM: Protein of unknown function (DUF494); Belongs to the Smg family.
  
     0.620
AGA90726.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2058).
  
   
 0.614
AGA91658.1
Glycine cleavage system regulatory protein; PFAM: ACT domain.
  
    0.583
AGA91134.1
PFAM: HNH endonuclease; manually curated.
  
     0.581
AGA90852.1
Hypothetical protein.
  
     0.575
zipA
Cell division protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.563
AGA89992.1
PFAM: Uncharacterised protein family (UPF0149); Belongs to the UPF0149 family.
  
     0.555
AGA89681.1
PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
  
    0.552
AGA91365.1
Hypothetical protein; PFAM: Sporulation related domain.
  
     0.483
AGA88975.1
PFAM: Protein of unknown function (DUF526).
  
    0.467
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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