STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA89698.1Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641). (322 aa)    
Predicted Functional Partners:
AGA89699.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2064).
 
     0.946
AGA89695.1
Hypothetical protein.
 
     0.945
AGA89696.1
Sterol desaturase; PFAM: Fatty acid hydroxylase superfamily.
 
     0.866
AGA89697.1
Hypothetical protein.
 
     0.808
AGA89694.1
Hypothetical protein.
       0.522
AGA90022.1
Putative membrane protein; PFAM: Domain of unknown function DUF.
  
     0.467
AGA90198.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.431
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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