Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA89738.1Hypothetical protein. (516 aa)    
Predicted Functional Partners:
AGA89737.1
Hypothetical protein.
       0.805
AGA89736.1
PFAM: Protein kinase domain.
       0.741
AGA89735.1
Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE).
       0.736
AGA89734.1
Uncharacterized protein; PFAM: von Willebrand factor type A domain.
       0.706
AGA89740.1
Hypothetical protein.
       0.637
AGA89739.1
ATPase family protein associated with various cellular activities (AAA); PFAM: AAA domain (dynein-related subfamily).
       0.576
AGA89741.1
Hypothetical protein.
       0.576
AGA89733.1
Hypothetical protein.
       0.538
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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