Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGA88969.1 | AGA89856.1 | Thimo_0094 | Thimo_1051 | PAS domain S-box; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box. | PFAM: Protein of unknown function DUF88. | 0.423 |
| AGA89856.1 | AGA88969.1 | Thimo_1051 | Thimo_0094 | PFAM: Protein of unknown function DUF88. | PAS domain S-box; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box. | 0.423 |
| AGA89856.1 | AGA90676.1 | Thimo_1051 | Thimo_1910 | PFAM: Protein of unknown function DUF88. | Putative transcriptional regulator; PFAM: Ribbon-helix-helix protein, copG family. | 0.419 |
| AGA89856.1 | AGA90718.1 | Thimo_1051 | Thimo_1953 | PFAM: Protein of unknown function DUF88. | PFAM: RNB domain. | 0.465 |
| AGA89856.1 | acsA | Thimo_1051 | Thimo_1052 | PFAM: Protein of unknown function DUF88. | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.423 |
| AGA89856.1 | trmB | Thimo_1051 | Thimo_2043 | PFAM: Protein of unknown function DUF88. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.530 |
| AGA90676.1 | AGA89856.1 | Thimo_1910 | Thimo_1051 | Putative transcriptional regulator; PFAM: Ribbon-helix-helix protein, copG family. | PFAM: Protein of unknown function DUF88. | 0.419 |
| AGA90718.1 | AGA89856.1 | Thimo_1953 | Thimo_1051 | PFAM: RNB domain. | PFAM: Protein of unknown function DUF88. | 0.465 |
| acsA | AGA89856.1 | Thimo_1052 | Thimo_1051 | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | PFAM: Protein of unknown function DUF88. | 0.423 |
| trmB | AGA89856.1 | Thimo_2043 | Thimo_1051 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | PFAM: Protein of unknown function DUF88. | 0.530 |