STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA90241.1Fe-S oxidoreductase; PFAM: Radical SAM superfamily. (597 aa)    
Predicted Functional Partners:
AGA91498.1
PFAM: V4R domain; TIGRFAM: bacteriochlorophyll 4-vinyl reductase.
 
  
 0.690
AGA90240.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
 
    
0.620
AGA90377.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase.
   
    0.481
AGA91191.1
Putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.472
AGA90244.1
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
    0.460
AGA90242.1
Hypothetical protein.
       0.456
AGA90243.1
Hypothetical protein.
       0.456
AGA90899.1
Hypothetical protein.
  
     0.450
AGA91291.1
Hypothetical protein.
  
     0.441
AGA90728.1
PFAM: Protein of unknown function (DUF465).
   
    0.418
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.