STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA90374.1Putative NTPase (NACHT family); PFAM: NACHT domain. (773 aa)    
Predicted Functional Partners:
AGA90373.1
Hypothetical protein.
      0.901
AGA89088.1
WD40 repeat-containing protein; PFAM: Pentapeptide repeats (8 copies); WD domain, G-beta repeat; NACHT domain.
 
     0.671
AGA91425.1
DNA sulfur modification protein DndE; PFAM: Domain of unknown function (DUF1832); TIGRFAM: DNA sulfur modification protein DndE; manually curated.
  
     0.557
AGA90372.1
PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase.
       0.499
AGA91424.1
TIGRFAM: DNA sulfur modification protein DndD.
 
     0.496
AGA91431.1
DNA phosphorothioation system restriction enzyme; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: DNA phosphorothioation system restriction enzyme.
 
     0.484
AGA91428.1
TIGRFAM: DNA sulfur modification protein DndD.
 
     0.479
AGA91585.1
Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
     0.471
AGA91423.1
Putative sulfurtransferase DndC; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: putative sulfurtransferase DndC.
  
     0.470
AGA90227.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; 4'-phosphopantetheinyl transferase superfamily; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
     0.440
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.