Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA90701.1Selenocysteine lyase; PFAM: Aminotransferase class-V. (374 aa)    
Predicted Functional Partners:
AGA91931.1
NifQ; PFAM: NifQ.
  
 
 0.940
AGA90962.1
PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
 
  
 0.883
AGA91977.1
SufE protein probably involved in Fe-S center assembly; PFAM: Fe-S metabolism associated domain.
  
 
 0.832
AGA90961.1
FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 
 0.788
AGA90963.1
FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 
 0.780
AGA90702.1
PFAM: Cache domain.
       0.547
AGA91159.1
Cysteine desulfurase-like protein, SufS subfamily; PFAM: Fe-S metabolism associated domain; Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
0.537
AGA90960.1
FeS assembly SUF system protein; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
 
  
 0.448
AGA88885.1
Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase.
 
  
 0.403
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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