STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA90771.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
AGA90772.1
Type II secretory pathway, component ExeA (predicted ATPase); PFAM: Putative peptidoglycan binding domain; ATPase family associated with various cellular activities (AAA).
 
     0.942
AGA88929.1
PFAM: General secretion pathway protein M.
  
     0.504
AGA90773.1
Putative glycerate kinase; PFAM: MOFRL family.
       0.499
AGA91003.1
Nuclease-like protein; PFAM: Nuclease-related domain.
  
     0.490
AGA92141.1
PFAM: Predicted periplasmic lipoprotein (DUF2279).
  
     0.465
AGA88926.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.436
AGA91292.1
Hypothetical protein.
  
     0.429
AGA91951.1
PFAM: Tetratricopeptide repeat.
  
     0.405
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.