Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA90906.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (448 aa)    
Predicted Functional Partners:
AGA90904.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 0.999
AGA90905.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 0.999
AGA90907.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.999
AGA90823.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.997
AGA91676.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 0.997
AGA90908.1
PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
  0.994
AGA90474.1
ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
 0.992
AGA90824.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 
0.927
AGA91067.1
Hypothetical protein.
  
 
 0.870
AGA90903.1
Hypothetical protein.
       0.668
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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