STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA91691.1Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (47 aa)    
Predicted Functional Partners:
AGA91689.1
Photosynthetic reaction center L subunit; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosynthetic reaction center L subunit.
  
 0.950
AGA91688.1
Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
   
 0.942
AGA91687.1
Photosynthetic reaction centre cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
   
 0.941
AGA91692.1
Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
  
 0.939
AGA91685.1
Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
  
 0.918
AGA91683.1
Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
  
 0.904
AGA91482.1
Photosynthetic reaction center, subunit H, bacterial; PFAM: Photosynthetic reaction centre, H-chain N-terminal region; PRC-barrel domain; TIGRFAM: photosynthetic reaction center, subunit H, bacterial.
    
 0.887
AGA90917.1
Hypothetical protein.
    
 0.850
AGA91710.1
Photosynthetic reaction center, subunit H, bacterial; PFAM: Photosynthetic reaction centre, H-chain N-terminal region; PRC-barrel domain; TIGRFAM: photosynthetic reaction center, subunit H, bacterial.
    
 
 0.831
AGA91690.1
Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
  0.700
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.