Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA91774.1Tfp pilus assembly protein PilF. (794 aa)    
Predicted Functional Partners:
AGA91764.1
PFAM: Protein of unknown function (DUF3485); Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: EpsI family protein; eight transmembrane protein EpsH (proposed exosortase).
 
     0.773
AGA91766.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein.
 
     0.773
AGA91772.1
TIGRFAM: TIGR03790 family protein.
  
     0.702
AGA91227.1
Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.668
AGA91768.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; TIGRFAM: putative polysaccharide export protein, PEP-CTERM sytem-associated.
 
     0.659
AGA90322.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
  
     0.551
AGA91765.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
     0.545
AGA89204.1
ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family.
 
     0.520
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.501
AGA91815.1
PFAM: Tetratricopeptide repeat.
 
   
 0.497
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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