STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA91846.1Tfp pilus assembly protein PilX. (190 aa)    
Predicted Functional Partners:
AGA91847.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.988
AGA91848.1
TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.988
AGA91845.1
Tfp pilus assembly protein, tip-associated adhesin PilY1; PFAM: Neisseria PilC protein.
 
  
 0.981
AGA91849.1
PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.968
AGA91844.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.946
AGA88924.1
General secretion pathway protein H; PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H.
 
  
 0.804
AGA89646.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.762
AGA88961.1
PFAM: Pilus assembly protein, PilP.
  
  
 0.720
AGA88960.1
PFAM: Pilus assembly protein, PilO.
 
  
 0.717
AGA88959.1
PFAM: Fimbrial assembly protein (PilN).
 
   
 0.699
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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