STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA91848.1TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain. (161 aa)    
Predicted Functional Partners:
AGA91847.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.993
AGA91846.1
Tfp pilus assembly protein PilX.
 
  
 0.988
AGA91849.1
PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.973
AGA91845.1
Tfp pilus assembly protein, tip-associated adhesin PilY1; PFAM: Neisseria PilC protein.
 
  
 0.970
AGA91844.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.934
AGA88961.1
PFAM: Pilus assembly protein, PilP.
  
  
 0.797
AGA89646.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.797
AGA88960.1
PFAM: Pilus assembly protein, PilO.
 
   
 0.791
AGA88959.1
PFAM: Fimbrial assembly protein (PilN).
 
   
 0.778
AGA89649.1
Hypothetical protein.
  
  
 0.761
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.