STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA91908.1Nitrogen fixation protein NifM; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; TIGRFAM: nitrogen fixation protein NifM. (295 aa)    
Predicted Functional Partners:
AGA91909.1
NifZ domain-containing protein; PFAM: NifZ domain.
   
 0.957
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
   
 0.870
AGA91920.1
PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT.
 
  
 0.764
AGA91911.1
Hypothetical protein.
 
 
   0.717
AGA91917.1
Hypothetical protein.
 
    0.640
AGA89470.1
Hypothetical protein.
 
    0.632
AGA90070.1
Nitrogen fixation negative regulator NifL; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; nitrogen fixation negative regulator NifL.
  
 
 
 0.631
AGA91912.1
PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
   
 0.595
AGA89793.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
  
     0.582
AGA91931.1
NifQ; PFAM: NifQ.
 
  
 0.469
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.