Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA92136.1Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. (572 aa)    
Predicted Functional Partners:
AGA90755.1
PFAM: Type I restriction modification DNA specificity domain.
  
 
 0.894
AGA92117.1
PFAM: Type I restriction modification DNA specificity domain; manually curated.
  
 
 0.894
AGA92125.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
  
  
 0.799
AGA92137.1
Hypothetical protein.
       0.773
AGA92135.1
Hypothetical protein.
 
     0.749
AGA92134.1
Hypothetical protein.
   
   0.668
AGA90749.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; EcoEI R protein C-terminal.
  
 
 0.648
AGA92138.1
RES domain-containing protein; PFAM: RES domain.
       0.529
AGA89737.1
Hypothetical protein.
  
  
 0.430
AGA92139.1
PFAM: Protein of unknown function (DUF2384).
       0.423
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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