STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA92316.1PFAM: Universal stress protein family. (143 aa)    
Predicted Functional Partners:
AGA92317.1
PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.735
AGA90351.1
PAS domain S-box; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.474
AGA91226.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
     0.449
AGA92319.1
Putative signal-transduction protein containing cAMP-binding and CBS domains; PFAM: CBS domain; Putative nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294.
  
    0.442
AGA91506.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
     0.425
AGA90186.1
Hypothetical protein.
  
     0.417
AGA90190.1
Ca2+/Na+ antiporter; PFAM: Sodium/calcium exchanger protein.
 
     0.413
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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