STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33852.1S23 ribosomal protein; PFAM: 23S rRNA-associated protein; KEGG: dly:Dehly_1438 30S ribosomal protein S23. (119 aa)    
Predicted Functional Partners:
EGV31315.1
KEGG: alv:Alvin_3011 general secretion pathway protein J.
  
 0.962
EGV31316.1
KEGG: alv:Alvin_3010 general secretion pathway protein K.
  
 
 0.923
EGV31310.1
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.809
EGV29078.1
KEGG: alv:Alvin_0163 type IV-A pilus assembly ATPase PilB; TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal.
  
 0.809
EGV30529.1
KEGG: tkm:TK90_0927 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family.
    
   0.738
EGV29885.1
KEGG: alv:Alvin_0848 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
  
  
 0.686
EGV33853.1
KEGG: alv:Alvin_1367 CbbQ/NirQ/NorQ domain-containing protein.
       0.625
EGV31311.1
PFAM: Type II secretion system F domain; KEGG: alv:Alvin_3015 type II secretion system F domain-containing protein.
  
  
 0.609
EGV29079.1
PFAM: Type II secretion system F domain; KEGG: alv:Alvin_0162 type II secretion system F domain-containing protein.
  
  
 0.609
EGV32129.1
KEGG: alv:Alvin_1719 hypothetical protein.
   
 0.608
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.