STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33992.1KEGG: nhl:Nhal_3656 hypothetical protein. (123 aa)    
Predicted Functional Partners:
EGV33991.1
PFAM: Glycosyl transferase, group 1; KEGG: nhl:Nhal_0445 glycosyl transferase group 1.
 
     0.947
EGV33993.1
PFAM: Glycosyl transferase, family 2; KEGG: noc:Noc_0752 glycosyl transferase family protein.
 
   
 0.934
EGV33985.1
KEGG: hth:HTH_1170 hypothetical protein.
 
     0.743
EGV33983.1
LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; Glycosyl transferase, family 2; KEGG: mca:MCA2558 glycosyl transferase, group 2 family protein.
 
   
 0.636
EGV32625.1
PFAM: CRISPR-associated protein TM1802; KEGG: mtp:Mthe_0638 CRISPR-associated Csh1 family protein.
  
     0.420
EGV33994.1
KEGG: alv:Alvin_3074 hypothetical protein.
       0.419
EGV33907.1
PFAM: Glycosyl transferase, family 2; KEGG: mca:MCA2558 glycosyl transferase, group 2 family protein.
 
   
 0.418
EGV30435.1
KEGG: tmz:Tmz1t_0517 conserved hypothetical cytosolic protein.
  
     0.411
EGV33295.1
PFAM: Glycosyl transferase, family 2; KEGG: mmr:Mmar10_2479 glycosyl transferase family protein.
 
     0.404
EGV31313.1
TIGRFAM: General secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal; KEGG: nhl:Nhal_0442 general secretion pathway protein H.
  
     0.404
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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