STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33656.1TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: alv:Alvin_2039 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit. (369 aa)    
Predicted Functional Partners:
EGV33659.1
KEGG: alv:Alvin_2036 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 0.999
EGV33622.1
KEGG: slt:Slit_1617 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit.
 0.998
EGV32883.1
KEGG: alv:Alvin_2308 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 0.998
EGV30005.1
KEGG: azo:azo3808 ferredoxin hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit.
 0.995
EGV32885.1
TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; KEGG: alv:Alvin_2307 Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
 
 0.992
EGV30272.1
KEGG: dar:Daro_2889 nickel-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase, large subunit.
 0.989
EGV31340.1
PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.986
EGV30779.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: alv:Alvin_0264 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
 
 0.986
EGV32888.1
PFAM: HupH hydrogenase expression protein, C-terminal conserved region; KEGG: azo:azo3795 hydrogenase-1 operon protein HupH.
 
 
 0.941
EGV33654.1
Hydrogenase maturation protease; KEGG: tgr:Tgr7_1271 peptidase M52, hydrogen uptake protein; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein.
 
  
 0.930
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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