STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33277.1KEGG: alv:Alvin_2698 hypothetical protein. (585 aa)    
Predicted Functional Partners:
EGV33276.1
KEGG: alv:Alvin_2697 TPR repeat-containing protein.
 
     0.948
EGV33275.1
KEGG: alv:Alvin_2696 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; overlaps another CDS with the same product name.
 
     0.904
EGV33274.1
KEGG: alv:Alvin_2695 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; overlaps another CDS with the same product name.
 
     0.888
EGV33717.1
KEGG: alv:Alvin_1900 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; von Willebrand factor, type A; SMART: Tetratricopeptide repeat.
  
     0.742
EGV32392.1
KEGG: alv:Alvin_1914 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.741
EGV33719.1
KEGG: alv:Alvin_1902 hypothetical protein.
  
     0.725
EGV31342.1
KEGG: alv:Alvin_1139 periplasmic protein-like protein.
  
     0.716
EGV28030.1
PFAM: Protein of unknown function DUF58; KEGG: alv:Alvin_2693 hypothetical protein.
 
     0.670
EGV33718.1
KEGG: alv:Alvin_1901 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A.
 
     0.664
EGV34058.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; Diguanylate cyclase, predicted; KEGG: alv:Alvin_0059 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region.
  
     0.650
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.