STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33315.1TIGRFAM: PQQ-dependent catabolism-associated CXXCW motif protein; KEGG: met:M446_5755 hypothetical protein. (197 aa)    
Predicted Functional Partners:
EGV33316.1
TIGRFAM: quinoprotein dehydrogenase-associated ABC transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; KEGG: msl:Msil_1585 extracellular solute-binding protein family 3; SMART: Extracellular solute-binding protein, family 3.
   
 0.971
EGV28841.1
TIGRFAM: Amino acid adenylation; KEGG: rso:RS05860 peptide synthetase protein; PFAM: Beta-ketoacyl synthase, N-terminal; AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Aminotransferase class-III; Condensation domain.
  
 0.962
EGV33317.1
KEGG: xau:Xaut_1780 putative cytochrome c protein.
 
  
 0.961
EGV29520.1
SMART: Phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: alv:Alvin_1501 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Phospholipid/glycerol acyltransferase.
  
 
 0.925
EGV33384.1
KEGG: mca:MCA0298 metallo-beta-lactamase family protein.
 
 0.913
EGV33318.1
TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG: sno:Snov_1035 PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal.
 
   
 0.898
EGV33387.1
PFAM: Sulphur oxidation protein SoxZ; KEGG: mpt:Mpe_A2085 hypothetical protein.
 
  
 0.882
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.868
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.855
rplQ
TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: alv:Alvin_2337 50S ribosomal protein L17; PFAM: Ribosomal protein L17.
  
   0.850
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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