STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33430.1Beta-galactosidase; TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; KEGG: alv:Alvin_0615 beta-galactosidase; PFAM: Glycoside hydrolase, family 1. (452 aa)    
Predicted Functional Partners:
EGV31025.1
KEGG: dvm:DvMF_0208 EAL domain protein; PFAM: Diguanylate phosphodiesterase, predicted; Phosphotransferase system, EIIC; SMART: Diguanylate phosphodiesterase, predicted.
 
 
 0.955
EGV33161.1
TIGRFAM: 1-phosphofructokinase; KEGG: app:CAP2UW1_2060 1-phosphofructokinase; PFAM: Carbohydrate/purine kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.928
EGV27862.1
KEGG: xcv:XCV3406 putative secreted protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III.
   
 
 0.918
EGV30059.1
PFAM: Glycosyltransferase 36; Putative carbohydrate binding; Glycosyltransferase 36 associated; KEGG: alv:Alvin_1155 glycosyltransferase 36.
    
 0.897
EGV28061.1
KEGG: syn:slr0168 hypothetical protein.
   
 
 0.867
EGV28121.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: alv:Alvin_0920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase.
    
 0.859
glk
TIGRFAM: Glucokinase; KEGG: alv:Alvin_1326 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
   
  0.849
EGV28746.1
PFAM: Glycosyl transferase, family 2; KEGG: alv:Alvin_0275 family 2 glycosyl transferase.
    
 0.807
EGV33160.1
KEGG: meh:M301_1127 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, phosphocarrier HPr protein; PFAM: PEP-utilising enzyme; Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region.
  
  
 0.770
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.714
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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