STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV33149.1PFAM: Bacterial stress protein; KEGG: alv:Alvin_2588 stress protein. (192 aa)    
Predicted Functional Partners:
EGV33151.1
PFAM: Tellurite resistance TerB; KEGG: alv:Alvin_2586 tellurite resistance TerB.
  
 0.983
EGV33148.1
KEGG: alv:Alvin_2589 hypothetical protein.
 
     0.889
EGV33154.1
KEGG: alv:Alvin_2583 ATP/GTP-binding protein.
 
   
 0.842
EGV33152.1
KEGG: alv:Alvin_2585 hypothetical protein.
 
     0.792
EGV33150.1
PFAM: Tellurium resistance; Bacterial stress protein; KEGG: alv:Alvin_2587 tellurium resistance.
 
  
0.790
EGV32801.1
KEGG: alv:Alvin_2584 hypothetical protein.
 
     0.790
EGV33146.1
PFAM: Bacterial stress protein; Tellurium resistance; KEGG: alv:Alvin_2591 stress protein.
 
    
0.556
EGV33145.1
Protein of unknown function DUF124; KEGG: alv:Alvin_2592 hypothetical protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124.
 
     0.510
EGV33147.1
Hypothetical protein.
       0.504
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
     
 0.408
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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